Effects of vegetation pattern and of biochar and powdery soil amendments on soil loss by wind in a semi-arid region

Dust emission from wind erosion is a widespread phenomenon in arid and semi-arid areas having considerable implications for ecosystems and human well-being. However, few studies have examined the efficiency of biochar amended to soil on wind erosion control. Aimed at studying the effect of biochar on resistance of soils against wind erosion, a wind tunnel experiment was conducted. We tested (a) soils amended with hard waste walnut wood biochar and soft maize cob biochar, and (b) soils amended with powdery waste wood and powdery maize cob, and compared them with (c) non-treated soil, in their susceptibility to wind erosion and also the additional effect of various patterns of vegetation cover. Amending soil with biochar and powdery material did significantly increase their resilience to wind erosion because of increased soil aggregation. In comparison with the non-treated control, the mass flux of un-vegetated soil reduced from 4.42 to 1.86 g m⁻² s⁻¹ for the waste walnut wood biochar, from 4.28 to 1.50 g m⁻² s⁻¹ for maize cob biochar, from 4.11 to 1.44 g m⁻² s⁻¹ for powdery maize cob and from 3.97 to 1.14 g m⁻² s⁻¹ for powdery waste walnut wood. When combining amendments with vegetation, there was still a substantial improvement, though the soil treatments responded differently in terms of soil loss to different vegetation patterns. A single row vegetation pattern had the highest mass flux, while a zigzag vegetation pattern had the lowest. In conclusion, waste wood or maize cobs, whether applied as biochar or as powdery material, are able to fix soil and reduce wind erosion.     

Arcobacter, what is known and unknown about a potential foodborne zoonotic agent!

Since the introduction of the genus Arcobacter in 1991, the association of Arcobacter butzleri, Arcobacter cryaerophilus and Arcobacter skirrowii with humans and animals has been clearly established. These bacteria have been detected world wide in products of animal origin and in healthy animals as well as in surface water. A fourth species Arcobacter cibarius was recently discovered on chicken carcasses. Although evidence was found for the connection of Arcobacter spp. with human and animal illness, Arcobacter spp. can be pathogens, opportunistic pathogens and commensals. Their potential as zoonotic foodborne and waterborne agents, the routes of transmission and the pathogenic mechanisms of these bacteria are largely unknown. Production of toxins or other virulence factors has not been demonstrated but adhesive and/or invasive properties were apparent. Antibiotic resistance is present in Arcobacter strains to significant levels. The tools to genetically access Arcobacter-like transformation of strains, construction of mutants are not yet available. Nor have genes (i.e. potential virulence factors) been cloned, expressed and characterized in other host organisms. Therefore those interested in the microbiology of these organisms eagerly await publication of the complete nucleotide sequence of the Arcobacter genome. The abundant presence of four Arcobacter species in foods of animal origin and the recovery of these bacteria from surface and drinking water suggest an important role of these bacteria as foodborne or waterborne agent and possibly as zoonotic agent.     

First documented Capnocytophaga canimorsus infection in a species other than humans

Capnocytophaga canimorsus was cultured from an infected, dog-inflicted bite wound in a pet rabbit. The wound was treated successfully and the rabbit recovered. To our knowledge, this is the first report of a C. canimorsus infection in a species other than humans.     

Toward metrological traceability for DNA fragment ratios in GM quantification. 1. Effect of DNA extraction methods on the quantitative determination of Bt176 corn by real-time PCR

An international CCQM-P60 pilot study involving eight national metrological institutes was organized to investigate if the quantification of genetically modified (GM) corn powder by real-time PCR was affected by the DNA extraction method applied. Four commonly used extraction methods were compared for the extraction of DNA from a GM Bt176 corn powder. The CTAB-based method yielded the highest DNA template quantity and quality. A difference in the 260 nm/230 nm absorbance ratio was observed among the different extraction methods. Real-time amplification of sequences specific for endogenous genes zein and hmg as well as transgenic sequences within the cryIA(b) gene and a fragment covering the junction between the transformed DNA and the plant genome were used to determine the GM percentage. The detection of the transgenic gene was affected by the quantity and quality of template used for the PCR reaction. The Bt176 percentages measured on diluted or purified templates were statistically different depending on the extraction method applied.     

Resistance screening of <Emphasis Type="Italic">Coffea</Emphasis> spp. accessions for <Emphasis Type="Italic">Pratylenchus coffeae</Emphasis> and <Emphasis Type="Italic">Radopholus arabocoffeae</Emphasis> in Vietnam

Coffee varieties with resistance for the plant-parasitic nematodes Pratylenchus coffeae and Radopholus arabocoffeae are limited in Vietnam. A selection of imported varieties and high yield varieties of Arabica coffee in Vietnam were evaluated for resistance to both plant-parasitic nematode species in Northern Vietnam. The same experiments were carried out with hybrid arabica coffee, three selected clones of Coffea canephora and one clone of Coffea excelsa in the Western Highland of Vietnam. The screened coffee accessions from Ethiopia (KH1, KH13, KH20, KH21, KH29, and KH31) were susceptible and good host for P. coffeae. Also accessions 90P4 (Portugal) and Oro azteca (Mexico) had a reproduction factor Rf > 1. Pluma Hidalgo (Mexico), 90/6 (Vietnam), 90P3 (Portugal), 90P2 (Vietnam), Variedad (Mexico), 90T (Portugal), and Garnica (Mexico) were poor hosts (Rf < 1) but not tolerant to P. coffeae, expressed by a reduction of root weight compared to untreated control plants. Most of the coffee accessions tested in Northern Vietnam were intolerant to R. arabocoffeae, except 90T which showed no reduction of root weight, even at high initial nematode densities (4,000/pot). Good hosts for R. arabocoffeae were Variedad, KH1, KH21, KH29, KH20, KH31, and KH13 with Rf > 1. Pluma Hidalgo, 90/6, 90P3, 90P2, 90T, Oro azteca, and Garnica were poor hosts (Rf < 1). In the Western Highland experiment, all arabica coffee accessions were susceptible for P. coffeae with Rf ranging from 1.41 to 1.59. Tolerance to P. coffeae was found in C. liberica var. Dewevrei, Hong34 and Nhuantren. Coffea excelsa, Hong34, Nhuantren, and H1C19 were tolerant to R. arabocoffeae at the highest inoculation density (4,000 nematodes/pot). The most susceptible accessions were Nhuantren and K55. Resistance (Rf < 1) to R. arabocoffeae was found in C. liberica var. Dewevrei and Hong34. This article reports on the first screening for resistance and tolerance to P. coffeae and R. arabocoffeae in coffee accessions in Vietnam and shows promising results for enhanced coffee-breeding.     

Nematode succession during composting and the potential of the nematode community as an indicator of compost maturity

One of the key issues in compost research is to assess when the compost has reached a mature stage. The maturity status of the compost determines the quality of the final soil amendment product. The nematode community occurring in a Controlled Microbial Composting (CMC) process was analyzed with the objective of assessing whether the species composition could be used as a bio-indicator of the compost maturity status. The results obtained here describe the major shifts in species composition that occur during the composting process. Compared to terrestrial ecosystems, nematode succession in compost differs mainly in the absence of K-strategists and numerical importance of diplogastrids. At the beginning of the composting process (thermophilic phase), immediately after the heat peak, the nematode population is primarily built by bacterial feeding enrichment opportunists (cp-1) (Rhabditidae, Panagrolaimidae, Diplogastridae) followed by the bacterial-feeding general opportunists (cp-2) (Cephalobidae) and the fungal-feeding general opportunists (Aphelenchoididae). Thereafter, during the cooling and maturation stage, the bacterial-feeding-predator opportunistic nematodes (Mononchoides sp.) became dominant. Finally, at the most mature stage, the fungal-feeding Anguinidae (mainly Ditylenchus filimus) were most present. Both, the Maturity Index (MI) and the fungivorous/bacterivorous ratio (f/b ratio), increase as the compost becomes more mature (ranging, respectively, from 1 to 1.86 and from 0 to 11.90). Based on these results, both indices are suggested as potential suitable tools to assess compost maturity.     

Life history studies of the leafminer Liriomyza trifolii on susceptible and resistant cultivars of Dendranthema grandiflora

Summary The feeding, fecundity, mortality and rate of development of Liriomyza trifolii (Burgess) on 12 cultivars of Dendranthema grandiflora (Tzvel.) (Syn. Chrysanthemum morifolium (Ramat.)) were determined in no choice experiments. Number of feeding punctures, number of eggs laid and total number of larvae varied between cultivars but these characters were not strongly associated with leafminer population increase. Good indicators of host plant resistance were larval mortality, number of pupae and duration of the larval period. Of these three, larval mortality which could be as high as 98% was most suitable.Based on life history data it was predicted that Liriomyza trifolii cannot survive on the resistant cultivar Penny Lane. This prediction was verified experimentally.     

SEBAL for detecting spatial variation of water productivity and scope for improvement in eight irrigated wheat systems

A methodology has been developed to quantify spatial variation of crop yield, evapotranspiration (ET) and water productivity (WP_ET) using the SEBAL algorithm and high and low resolution satellite images. SEBAL-based ET estimates were validated over an irrigated, wheat dominated area in the Yaqui Valley, Mexico and proved to be accurate (8.8% difference for 110 days). Estimated average wheat yields in Yaqui Valley of 5.5 t ha⁻¹ were well within the range of measured yields reported in the literature. Measured wheat yields in 24 farmers’ fields in Sirsa district, India, were 0.4 t ha⁻¹ higher than SEBAL estimated wheat yields. Area average WP_ET in the Yaqui Valley was 1.37 kg m⁻³ and could be considered to be high as compared to other irrigated systems around the world where the same methodology was applied. A higher average WP_ET was found in Egypt's Nile Delta (1.52 kg m⁻³), Kings County (CA), USA (1.44 kg m⁻³) and in Oldambt, The Netherlands (1.39 kg m⁻³). The spatial variability of WP_ET within low productivity systems (CV = 0.33) is higher than in high productivity systems (CV = 0.05) because water supply in the former case is uncertain and farming conditions are sub-optimal. The high CV found in areas with low WP_ET indicates that there is considerable scope for improvement. The average scope for improvement in eight systems was 14%, indicating that 14% ET reduction can be achieved while maintaining the same yield. It is concluded that the proposed methodology is accurate and that better knowledge of the spatial variation of WP_ET provides valuable information for achieving local water conservation practices in irrigated wheat.